Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804499.1_cds_XP_016489120.1_7944
CDS Infomation

[gene=LOC107809041] [db_xref=GeneID:107809041] [protein=patatin-17-like] [protein_id=XP_016489120.1] [location=join(56342..56509,56619..56800,57004..57166,57285..57446,58543..58845,59213..59355,59458..59515)] [gbkey=CDS]
Sequence

ATGGCAACTATGGGATCTTTTTTTATTTTATTTTTTTTGGTACTGACAACTACTGGATCA
ACAATCTCTGTGGTGGGAGAAATGGTGACTGTTCTTAGCATTGATGGAGGTGGCATTAAA
GGCATCATCCCTGCTACTGTTCTTTCTTTTTTGGAAAGCCAACTCCAGGAATTAGACAAT
GATGAAAATGCAAGACTTGCAGATTACTTTGATGTGATTGCGGGGACAAGTACAGGTGGC
ATATTGACCACTATGATAAGTGCTCCAAATGAAAAGGGTCGTCCCTTCTCTGCTGCCAAA
GATATTGTATCCTTTTACTTCGAGCATGGCCCTAAGATTTTTCCACCTGGGGCCTGGCCT
CCCATTTTGGCCCCCAAATATGATGGAAAATATCTTCACAAAGTTCTGCAAGATAAGTTG
GGAGAGACTCGTTTGCATCAGACTTTAACAAATGTTGTTATTCCAACCTTTGACATGAAA
AAATTTCAGCCAACAATATTCACCAAGTCGGAGATAGCAAACTCTCCTCATTTGGATGCT
AAGATGTCTGACATATGCATTGGCACCTCGGCAGCTCCAACTTATTTTCCTCCATATTAC
TTTGAGAATGATGATGGTAAAGGAAATCAGTATGAGTTTAATCTTATTGATGGTGGTGTT
GTTGCTGCCAATCCGGCCTTAGTTGCCCTAAGCACAGTAACCTACAGTGCGGAAACGGAT
CCATCATTTGCTTATATCAAGCCATTGGACGTCAAAAACATTCTGCTGCTCTCGTTAGGG
ACCGGCACTACTGCTGATTTTGCTGGGAAATACACAGCACAGGAGGCAGCTAATTGGGGT
CTTATTTCCTGGCTGTTTCATAATAATTCGAATCCTCTTCGTGATATGCAATCTGAAGCA
AGTGCTACCATGAATGATTATTACATTGCCACCATCTATCGAGCTCTTGGTGCTGAAACG
AATTACCTCAGGATTGAAGAAAATGCATTAACTGGCACTACAACCCAAATGGATAATGCT
ACAGAGGCTAATATGAACTTATTGAAACAAATTGGTGAAAACTTGTTGAAGAAACCAGCT
TCCAATGGGAATTCTGAAACCAATGAGGAAGCTCTAAAGAGGTTTGCAAAATTACTCTCA
GAAAGGAAGAAACTCCGAGCAAACAAAGCTTCTCAATAA

Peptide Sequence

PEP ID

XP_016489120.1
PEP Infomation

PREDICTED: patatin-17-like [Nicotiana tabacum]
Sequence

MATMGSFFILFFLVLTTTGSTISVVGEMVTVLSIDGGGIKGIIPATVLSFLESQLQELDN
DENARLADYFDVIAGTSTGGILTTMISAPNEKGRPFSAAKDIVSFYFEHGPKIFPPGAWP
PILAPKYDGKYLHKVLQDKLGETRLHQTLTNVVIPTFDMKKFQPTIFTKSEIANSPHLDA
KMSDICIGTSAAPTYFPPYYFENDDGKGNQYEFNLIDGGVVAANPALVALSTVTYSAETD
PSFAYIKPLDVKNILLLSLGTGTTADFAGKYTAQEAANWGLISWLFHNNSNPLRDMQSEA
SATMNDYYIATIYRALGAETNYLRIEENALTGTTTQMDNATEANMNLLKQIGENLLKKPA
SNGNSETNEEALKRFAKLLSERKKLRANKASQ

Transcript Sequence

Gene sequence data has not been registered.